Index
A
|
C
|
D
|
E
|
F
|
I
|
L
|
M
|
N
|
P
|
R
|
S
|
U
A
adjusted_rand_index() (in module sumo.utils)
C
calculate_avg_adjacency() (sumo.modes.run.solver.SumoSolver method)
check_accuracy() (in module sumo.utils)
check_categories() (in module sumo.utils)
check_matrix_symmetry() (in module sumo.utils)
close_logger() (in module sumo.utils)
correlation() (in module sumo.modes.prepare.similarity)
cosine_sim() (in module sumo.modes.prepare.similarity)
create_classifier() (sumo.modes.interpret.interpret.SumoInterpret method)
create_sample_bins() (sumo.modes.run.solver.SumoSolver method)
(sumo.modes.run.solvers.supervised_sumo.SupervisedSumoNMF method)
D
docstring_formatter() (in module sumo.utils)
E
euclidean_dist() (in module sumo.modes.prepare.similarity)
extract_clusters() (sumo.modes.run.solver.SumoNMFResults method)
extract_max_value() (in module sumo.utils)
extract_ncut() (in module sumo.utils)
extract_spectral() (in module sumo.utils)
F
factorize() (sumo.modes.run.solver.SumoSolver method)
(sumo.modes.run.solvers.supervised_sumo.SupervisedSumoNMF method)
(sumo.modes.run.solvers.unsupervised_sumo.UnsupervisedSumoNMF method)
feature_rbf_similarity() (in module sumo.modes.prepare.similarity)
feature_to_adjacency() (in module sumo.modes.prepare.similarity)
filter_features_and_samples() (in module sumo.utils)
I
is_standardized() (in module sumo.utils)
L
load_all_data() (sumo.modes.prepare.prepare.SumoPrepare method)
load_data_text() (in module sumo.utils)
load_npz() (in module sumo.utils)
load_tsv() (sumo.modes.evaluate.evaluate.SumoEvaluate method)
M
MultiplexNet (class in sumo.network)
N
normalized_mutual_information() (in module sumo.utils)
P
plot_metric() (in module sumo.utils)
purity() (in module sumo.utils)
R
run() (sumo.modes.evaluate.evaluate.SumoEvaluate method)
(sumo.modes.interpret.interpret.SumoInterpret method)
(sumo.modes.mode.SumoMode method)
(sumo.modes.prepare.prepare.SumoPrepare method)
(sumo.modes.run.run.SumoRun method)
S
save_arrays_to_npz() (in module sumo.utils)
setup_logger() (in module sumo.utils)
sumo.modes.evaluate.evaluate (module)
sumo.modes.interpret.interpret (module)
sumo.modes.mode (module)
sumo.modes.prepare.prepare (module)
sumo.modes.prepare.similarity (module)
sumo.modes.run.run (module)
sumo.modes.run.solver (module)
sumo.modes.run.solvers.supervised_sumo (module)
sumo.modes.run.solvers.unsupervised_sumo (module)
sumo.network (module)
sumo.utils (module)
SumoEvaluate (class in sumo.modes.evaluate.evaluate)
SumoInterpret (class in sumo.modes.interpret.interpret)
SumoMode (class in sumo.modes.mode)
SumoNMFResults (class in sumo.modes.run.solver)
SumoPrepare (class in sumo.modes.prepare.prepare)
SumoRun (class in sumo.modes.run.run)
SumoSolver (class in sumo.modes.run.solver)
SupervisedSumoNMF (class in sumo.modes.run.solvers.supervised_sumo)
U
UnsupervisedSumoNMF (class in sumo.modes.run.solvers.unsupervised_sumo)
sumo
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